Convergent distributed object motion detection along mouse visual hierarchy

1Stanford Neuroscience Interdepartmental Program, Stanford CA, 94305
2Department of Neurobiology, Stanford CA, 94305
In Review

Abstract

Object trajectory to retina/LGN to primary visual cortex: when objects move vs. where objects move to.

To survive, animals must detect object motion to discriminate what lies in their field of vision. While object motion sensitivity in the retina detects the time and location of external motion, it does not give us an explanation of where that object is heading. Since the efficient encoding and untangling frameworks have been offered, we have understood that downstream regions inherit and transform upstream outputs for their higher order objectives. If retinal motion detection is passed down to higher visual areas, does the primary visual cortex inherit and transform object motion detection from the retina? Here, we investigate whether the mouse primary visual cortex has object motion sensitive (OMS) properties using naturalistic virtual reality, modern computer vision methods, and single-cell recordings of the retina and cortex. Comparing neural responses to differential motion and global motion, we find that the retinal OMS cells detect “when and where” an object moves and the cortex detects “what is its pattern” the object moves to. Our model manifold analysis of the retinal and cortical networks reveals drastically different topologies in these visual regions suggesting that the mouse brain has convergent and distributed motion detection computations along the visual hierarchy.

Technical Summary

Method Overview

Cortical experiment: in-vivo eye tracking, V1 population recording, and a gaze-shifted convolutional model predicting firing rates.

In-vivo cortical experiment — V1 population recording

Retinal experiment: video display via mirror onto retina on a multi-electrode array, with a gaze-shifted convolutional model predicting firing rates.

Retinal experiment — retina-on-array MEA recording

We record neural responses to naturalistic virtual reality with gaze shifted from in-vivo eye tracking, capturing V1 population activity in-vivo and retinal responses on a multi-electrode array. Convolutional neural network models of the retina and cortex are trained to predict single-cell firing rates from the same gaze-shifted stimulus, providing a shared computational substrate for comparing the two regions.

Predicting Object Motion Sensitivity

Object motion sensitivity: differential vs. global motion stimuli, and jitter/drift OMS indices for retinal CNN, cortical CNN, and raw recordings.

Differential motion (DM) moves the center and surround independently, while global motion (GM) moves them together. Comparing jitter and drift OMS indices across the retinal CNN, the cortical CNN, and the raw recordings, we find that retinal OMS cells are jitter-preferring—detecting when an object moves—while cortical cells shift toward drift-preferring responses that encode where the object moves to.

Retinal and Cortical Model Manifolds

Our model manifold analysis reveals drastically different topologies in the retinal and cortical networks. Toggle between stimulus probes below to compare how each region organizes its responses.

Retinal model

Retinal NS1 OMS encoding manifold (jitter OMS), rotating 3D diffusion map.

Retinal model — OMS probe (jitter OMS)

Cortical model

Cortical V1 (goldroger) OMS encoding manifold (drift OMS), rotating 3D diffusion map.

Cortical model — OMS probe (drift OMS)

Retinal model

Retinal model stimulus manifold under WN/NS probe.

Retinal model — WN/NS probe

Cortical model

Cortical model stimulus manifold under WN/NS probe.

Cortical model — WN/NS probe

Raw Data Neural Manifold (V1)

Neural manifolds computed directly from the raw V1 population recordings. Toggle between neural stimulus conditions below to fly through each manifold.

Raw V1 neural manifold flythrough under naturalistic scene 1 (NS1) stimulus.

V1 raw-data neural manifold — NS1 probe

Raw V1 neural manifold flythrough under naturalistic scene 2 (NS2) stimulus.

V1 raw-data neural manifold — NS2 probe

Raw V1 neural manifold flythrough under white-noise (WN) stimulus.

V1 raw-data neural manifold — WN probe

Notably, our end-to-end trained cortical models appear to recover manifold shapes and distributions strikingly similar to those of the raw V1 neural manifold.

Application: Detecting Camouflaged Objects

Evaluated on the Moving Camouflaged Animals (MoCA) dataset, the retinal and cortical models reveal a division of labor: the retinal model produces focal, spatially invariant activations that flag that a camouflaged animal is moving, while the cortical model produces an extended, orientation-tuned activation spanning the animal's body that resolves where it is and how it is oriented.

Arctic fox (MoCA). Left: raw video. Center: retinal-model activation — focal to animal motion. Right: cortical-model activation — extended across the animal's body.

BibTeX

@article{weddington2026oms,
  author    = {Weddington, Javier C. and Au, David D. and Melander, Joshua B. and Faragalla, Youssef and Alaoui, Zaki and Baccus, Stephen A.},
  title     = {Convergent distributed object motion detection along mouse visual hierarchy},
  journal   = {bioRxiv},
  year      = {2026},
  doi       = {10.64898/2026.07.27.740872},
  url       = {https://doi.org/10.64898/2026.07.27.740872},
  publisher = {Cold Spring Harbor Laboratory},
  note      = {Preprint},
}